Genetic Variation

Explore the Impact of Variants on Gene Structure

Gene Expression

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Pathways

Plant Reactome Pathways on Community Reference Genomes

News

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Tools

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Events

Upcoming Meetings and Conferences

Latest Community News

Genome Informatics Conference in Hinxton, U.K, Nov 13-15, 2024, Abstracts Due Sept 10
  • SorghumBase Team
  • 09 September 2024

The 24th Genome Informatics meeting will be held November 13-15 on the Wellcome Genome Campus in Hinxton, U.K. Virtual attendance is available.

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Job Opening: Spark Climate Solutions – Program Lead, Agricultural Nitrogen Systems
  • SorghumBase Team
  • 29 August 2024

Spark is looking for a candidate who is deeply motivated by climate action, pollution abatement, and food security issues and is excited to engage with a broad range of internal and external stakeholders.

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Biological Data Science Conference from Nov 13-16 at CSHL, Oral Abstracts due Aug 23, Poster Abstracts due Oct 1
  • SorghumBase Team
  • 18 August 2024

The sixth meeting on Biological Data Science is taking place at Cold Spring Harbor Laboratory from November 13 to 16, 2024. The conference will focus on the infrastructure, software, and algorithms needed to analyze large data sets in biological research.

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Recent Research

Mechanisms of Aphid Resistance in Sorghum: The Role of Leaf Structure and Flavonoid Biosynthesis
  • SorghumBase Team
  • 09 September 2024

This study reveals that aphid resistance in sorghum is associated with specific leaf cell structures and the upregulation of flavonoid biosynthesis, with naringenin and genistein playing crucial roles in enhancing resistance.

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Regulation of Sorghum Root Growth and Low Nitrogen Tolerance by L-Tryptophan
  • SorghumBase Team
  • 18 August 2024

Tryptophan enhances sorghum root growth and tolerance to low nitrogen conditions by modulating IAA synthesis and carbon and nitrogen metabolism, suggesting its potential to improve crop resilience and yield.

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Identification of SbGATA22 as a Negative Regulator of Dhurrin Biosynthesis in Sorghum
  • SorghumBase Team
  • 05 August 2024

Rosati et al. identified SbGATA22 as a potential negative regulator of the dhurrin biosynthetic gene SbCYP79A1 in sorghum, providing preliminary insights into the molecular regulation of cyanogenic glucoside biosynthesis.

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Tools

Gene Search

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Genome Browser

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BLAST

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