The extracellular vesicle proteomes of Sorghum bicolor and Arabidopsis thaliana are partially conserved.

Chaya T, Banerjee A, Rutter BD, Adekanye D, Ross J, Hu G, Innes RW, Caplan JL

Published: 4 December 2023 in Plant physiology
Keywords: No keywords in Pubmed
Pubmed ID: 38048422
DOI: 10.1093/plphys/kiad644

Plant extracellular vesicles (EVs) are membrane-bound organelles involved mainly in intercellular communications and defense responses against pathogens. Recent studies have demonstrated the presence of proteins, nucleic acids including small RNAs, and lipids along with other metabolites in plant EVs. Here, we describe the isolation and characterization of EVs from sorghum (Sorghum bicolor). Nanoparticle tracking analysis, dynamic light scattering, and cryo-electron tomography showed the presence of a heterogeneous population of EVs isolated from the apoplastic wash of sorghum leaves. Cryo-electron microscopy revealed that EVs had a median size of 110 nm and distinct populations of vesicles with single or multiple lipid bilayers and low or high amounts of contents. The heterogeneity was further supported by data showing that only a subset of EVs that were stained with a membrane dye, Potomac Gold, were also stained with the membrane-permeant esterase-dependent dye, Calcein-acetoxymethyl ester. Proteomic analysis identified 437 proteins that were enriched in multiple EV isolations, with the majority of these also found in the EV proteome of Arabidopsis (Arabidopsis thaliana). These data suggest a partial conservation of EV contents and function between the monocot, sorghum, and a distantly related eudicot, Arabidopsis.

Department of Energy - Office of Biological and Environmental Research (BER) DE-SC0020348
Department of Energy - Office of Biological and Environmental Research (BER) KP1607011
National Institute of General Medical Sciences of the NIH P20 GM103446
National Institute of General Medical Sciences of the NIH P20 GM139760
National Institutes of Health S10 OD025165
National Institutes of Health S10 OD030321