A high-performance computational workflow to accelerate GATK SNP detection across a 25-genome dataset.
Zhou Y, Kathiresan N, Yu Z, Rivera LF, Yang Y, Thimma M, Manickam K, Chebotarov D, Mauleon R, Chougule K, Wei S, Gao T, Green CD, Zuccolo A, Xie W, Ware D, Zhang J, McNally KL, Wing RA
Published: 26 January 2024
in BMC biology
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Root responses to abiotic stress – a comparative look at root system architecture in maize and sorghum.
Hostetler AN, Morais de Sousa Tinoco S, Sparks EE
Published: 6 October 2023
in Journal of experimental botany
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Hormonal regulation of inflorescence and intercalary meristems in grasses.
Awale P, McSteen P
Published: 23 September 2023
in Current opinion in plant biology
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ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development.
Hou Q, An X, Ma B, Wu S, Wei X, Yan T, Zhou Y, Zhu T, Xie K, Zhang D, Li Z, Zhao L, Niu C, Long Y, Liu C, Zhao W, Ni F, Li J, Fu D, Yang ZN, Wan X
Published: 28 July 2023
in Molecular plant
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A leaf-level spectral library to support high throughput plant phenotyping: Predictive accuracy and model transfer.
Wijewardane NK, Zhang H, Yang J, Schnable JC, Schachtman DP, Ge Y
Published: 6 April 2023
in Journal of experimental botany
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Introducing sorghum DREB2 gene in maize (Zea mays L.) to improve drought and salinity tolerance.
Izadi-Darbandi A, Alameldin H, Namjoo N, Ahmad K
Published: 15 March 2023
in Biotechnology and applied biochemistry
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Cross-species predictive modeling reveals conserved drought responses between maize and sorghum.
Pardo J, Wai CM, Harman M, Nguyen A, Kremling KA, Romay MC, Lepak N, Bauerle TL, Buckler ES, Thompson AM, VanBuren R
Published: 28 February 2023
in Proceedings of the National Academy of Sciences of the United States of America
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Editorial: Genomic selection and characterization in cereals.
Rashid MAR, Sajjad M, Gul A, Zhao Y
Published: 31 January 2023
in Frontiers in genetics
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Comparative Proteomics Analysis between Maize and Sorghum Uncovers Important Proteins and Metabolic Pathways Mediating Drought Tolerance.
Ali AEE, Husselmann LH, Tabb DL, Ludidi N
Published: 22 January 2023
in Life (Basel, Switzerland)
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OMICS in Fodder Crops: Applications, Challenges, and Prospects.
Kumar P, Singh J, Kaur G, Adunola PM, Biswas A, Bazzer S, Kaur H, Kaur I, Kaur H, Sandhu KS, Vemula S, Kaur B, Singh V, Tseng TM
Published: 11 November 2022
in Current issues in molecular biology
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Association mapping across a multitude of traits collected in diverse environments in maize.
Mural RV, Sun G, Grzybowski M, Tross MC, Jin H, Smith C, Newton L, Andorf CM, Woodhouse MR, Thompson AM, Sigmon B, Schnable JC
Published: 24 August 2022
in GigaScience
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Combining GWAS and TWAS to identify candidate causal genes for tocochromanol levels in maize grain.
Wu D, Li X, Tanaka R, Wood JC, Tibbs-Cortes LE, Magallanes-Lundback M, Bornowski N, Hamilton JP, Vaillancourt B, Diepenbrock CH, Li X, Deason NT, Schoenbaum GR, Yu J, Buell CR, DellaPenna D, Gore MA
Published: 7 June 2022
in Genetics
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SNP-Based Genome-Wide Association Mapping of Pollen Viability Under Heat Stress in Tropical Zea mays L. Inbred Lines.
Ahmed Z, Khalid M, Ghafoor A, Shah MKN, Raja GK, Rana RM, Mahmood T, Thompson AM
Published: 5 April 2022
in Frontiers in genetics
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Genetic Architecture of Grain Yield-Related Traits in Sorghum and Maize.
Baye W, Xie Q, Xie P
Published: 11 March 2022
in International journal of molecular sciences
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Conserved co-functional network between maize and Arabidopsis aid in the identification of seed defective genes in maize.
Zhang X, Cui Y, Wang J, Huang Y, Qi Y
Published: 3 March 2021
in Genes & genomics
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Identification and evolution analysis of the JAZ gene family in maize.
Han Y, Luthe D
Published: 12 April 2021
in BMC genomics
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Simultaneous dissection of grain carotenoid levels and kernel color in biparental maize populations with yellow-to-orange grain.
LaPorte MF, Vachev M, Fenn M, Diepenbrock C
Published: 1 February 2022
in G3 (Bethesda, Md.)
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Leveraging histone modifications to improve genome annotations.
Mendieta JP, Marand AP, Ricci WA, Zhang X, Schmitz RJ
Published: 28 September 2021
in G3 (Bethesda, Md.)
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Chromosome-level genome assembly of a regenerable maize inbred line A188.
Lin G, He C, Zheng J, Koo DH, Le H, Zheng H, Tamang TM, Lin J, Liu Y, Zhao M, Hao Y, McFraland F, Wang B, Qin Y, Tang H, McCarty DR, Wei H, Cho MJ, Park S, Kaeppler H, Kaeppler SM, Liu Y, Springer N, Schnable PS, Wang G, White FF, Liu S
Published: 11 June 2021
in Genome biology
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Consumer Acceptance and Willingness to Pay for Instant Cereal Products With Food-to-Food Fortification in Eldoret, Kenya.
De Groote H, Mugalavai V, Ferruzzi M, Onkware A, Ayua E, Duodu KG, Ndegwa M, Hamaker BR
Published: 17 March 2020
in Food and nutrition bulletin
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A leucine-rich repeat-receptor-like kinase gene SbER2-1 from sorghum (Sorghum bicolor L.) confers drought tolerance in maize.
Li H, Han X, Liu X, Zhou M, Ren W, Zhao B, Ju C, Liu Y, Zhao J
Published: 17 October 2019
in BMC genomics
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High-throughput method for ear phenotyping and kernel weight estimation in maize using ear digital imaging.
Makanza R, Zaman-Allah M, Cairns JE, Eyre J, Burgueño J, Pacheco Á, Diepenbrock C, Magorokosho C, Tarekegne A, Olsen M, Prasanna BM
Published: 28 June 2018
in Plant methods
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